BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013F11SP1|AL426568
(572 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig906 377 e-104
>3x_Contig906
Length = 3719
Score = 377 bits (186), Expect = e-104
Identities = 232/254 (91%), Gaps = 2/254 (0%)
Strand = Plus / Plus
Query: 1 gatctcaaagtcaaaattataccgtccttagggaacaacgacgttttcccacataacttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1341 gatctcaaagtcaaaattataccgtccttagggaacaacgacgttttcccacataacttg 1400
Query: 61 ttttctccaggtcccacattacaaaccagagaactatacgatatttggagccagtycata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1401 ttttctccaggtcccacattacaaaccagagaactatacgatatttggagccagttcata 1460
Query: 121 ccaccmgcgccmcaamatacmttcgatagatatgcttccttttttgtggmagcgatccct 180
||||| |||| ||| |||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 1461 ccaccagcgcaacaaaatacattcgatagatatgcttccttttttgtggaagcgatccct 1520
Query: 181 gggacmctmgaccgtatmtmtcgctcmmtactttgtctmtgttccagggcaaccccttgg 240
|||| || | |||| | | |||||| |||||||| | ||||| |||||||||| ||||
Sbjct: 1521 gggaaactag-ccgt-tatatcgctcaatactttgtatatgttcaagggcaacccattgg 1578
Query: 241 tggatacctgtmgt 254
|||||| |||| ||
Sbjct: 1579 tggataactgtagt 1592
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1704
Number of Sequences: 1807
Number of extensions: 1704
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 572
length of database: 10,358,551
effective HSP length: 16
effective length of query: 556
effective length of database: 10,329,639
effective search space: 5743279284
effective search space used: 5743279284
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.8 bits)